myDGR

myDGR report for NC_009428.1

Seq: NC_009428.1 (3217726 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 1339254-1361322 bp 2 Locus 2: 2110382-2133327 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 1339254-1339541 bp Feature: CDS Location: 1339538-1341745 bp Feature: CDS Location: 1341745-1342401 bp Feature: CDS Location: 1342406-1343062 bp Feature: CDS Location: 1343059-1343466 bp Feature: CDS Location: 1343529-1347128 bp Feature: CDS Location: 1347173-1347721 bp Feature: CDS Location: 1347772-1349010 bp Feature: CDS Location: 1349019-1349351 bp Feature: target Des: target gene diversified by DGR Location: 1349351-1350403 bp Feature: accessory Des: Avd_like Location: 1350471-1350821 bp Feature: RT Des: DGR reverse transcriptase Location: 1351110-1352210 bp Feature: CDS Location: 1352483-1352986 bp Feature: CDS Location: 1352999-1353835 bp Feature: CDS Location: 1353832-1354164 bp Feature: CDS Location: 1353840-1353983 bp Feature: CDS Location: 1354161-1355108 bp Feature: CDS Location: 1355910-1358375 bp Feature: CDS Location: 1358299-1359081 bp Feature: CDS Location: 1359438-1359797 bp Feature: CDS Location: 1359818-1360207 bp Feature: CDS Location: 1360303-1361322 bp Feature: CDS Location: 2110382-2111023 bp Feature: CDS Location: 2111080-2111949 bp Feature: CDS Location: 2111946-2112554 bp Feature: CDS Location: 2112949-2114409 bp Feature: CDS Location: 2114406-2116163 bp Feature: CDS Location: 2116160-2116879 bp Feature: CDS Location: 2116876-2117643 bp Feature: CDS Location: 2117648-2118868 bp Feature: CDS Location: 2118981-2119610 bp Feature: CDS Location: 2119607-2120269 bp Feature: RT Des: DGR reverse transcriptase Location: 2120655-2121755 bp Feature: accessory Des: Avd_like Location: 2122044-2122394 bp Feature: target Des: target gene diversified by DGR Location: 2122462-2123514 bp Feature: CDS Location: 2123514-2123846 bp Feature: CDS Location: 2123855-2125093 bp Feature: CDS Location: 2125144-2125692 bp Feature: CDS Location: 2125737-2129336 bp Feature: CDS Location: 2129399-2129806 bp Feature: CDS Location: 2129803-2130459 bp Feature: CDS Location: 2130464-2131120 bp Feature: CDS Location: 2131120-2133327 bp Sorry, your browser does not support inline SVG.