myDGR

myDGR report for NC_011060.1

Seq: NC_011060.1 (3018238 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 755067-779459 bp 2 Locus 2: 1099822-1121480 bp 3 Locus 3: 1669053-1690808 bp 4 Locus 4: 2019111-2040100 bp 5 Locus 5: 2048212-2069915 bp 6 Locus 6: 2259483-2282263 bp 7 Locus 7: 2413644-2434666 bp 8 Locus 8: 2451896-2473214 bp Zoom in on locus 1 Zoom in on locus 2 Zoom in on locus 3 Zoom in on locus 4 Zoom in on locus 5 Zoom in on locus 6 Zoom in on locus 7 Zoom in on locus 8 Feature: CDS Location: 755067-756923 bp Feature: CDS Location: 757155-758414 bp Feature: CDS Location: 758444-759760 bp Feature: CDS Location: 759818-761713 bp Feature: CDS Location: 762014-762760 bp Feature: CDS Location: 762767-763300 bp Feature: CDS Location: 763303-763827 bp Feature: CDS Location: 763863-764669 bp Feature: CDS Location: 764883-766100 bp Feature: CDS Location: 766165-766365 bp Feature: target Des: target gene diversified by DGR Location: 766553-770158 bp Feature: CDS Location: 770261-770485 bp Feature: CDS Location: 770485-771789 bp Feature: CDS Location: 771965-772465 bp Feature: CDS Location: 772452-772979 bp Feature: CDS Location: 773011-773157 bp Feature: CDS Location: 773245-774663 bp Feature: CDS Location: 774978-776231 bp Feature: CDS Location: 776445-777098 bp Feature: CDS Location: 776460-779459 bp Feature: CDS Location: 1099822-1100055 bp Feature: CDS Location: 1100203-1101753 bp Feature: CDS Location: 1101766-1102377 bp Feature: CDS Location: 1102429-1104045 bp Feature: CDS Location: 1104191-1104343 bp Feature: CDS Location: 1104372-1104902 bp Feature: CDS Location: 1104920-1105426 bp Feature: CDS Location: 1105445-1106140 bp Feature: CDS Location: 1106266-1106649 bp Feature: CDS Location: 1106646-1107887 bp Feature: CDS Location: 1108042-1109553 bp Feature: CDS Location: 1109592-1110851 bp Feature: target Des: target gene diversified by DGR Location: 1110890-1111693 bp Feature: CDS Location: 1111717-1112043 bp Feature: CDS Location: 1112340-1112645 bp Feature: CDS Location: 1112767-1112922 bp Feature: CDS Location: 1113001-1113591 bp Feature: CDS Location: 1113757-1115202 bp Feature: CDS Location: 1115260-1115997 bp Feature: CDS Location: 1116172-1117089 bp Feature: CDS Location: 1117253-1118305 bp Feature: CDS Location: 1118323-1118946 bp Feature: CDS Location: 1119004-1120188 bp Feature: CDS Location: 1120278-1121480 bp Feature: CDS Location: 1669053-1670378 bp Feature: CDS Location: 1670659-1672248 bp Feature: CDS Location: 1672320-1672463 bp Feature: CDS Location: 1672473-1674740 bp Feature: CDS Location: 1674907-1675314 bp Feature: CDS Location: 1675981-1676208 bp Feature: CDS Location: 1676261-1677727 bp Feature: CDS Location: 1677839-1678372 bp Feature: CDS Location: 1678518-1678883 bp Feature: target Des: target gene diversified by DGR Location: 1679085-1682279 bp Feature: CDS Location: 1682309-1682725 bp Feature: CDS Location: 1682710-1683108 bp Feature: CDS Location: 1683058-1683363 bp Feature: CDS Location: 1683513-1684286 bp Feature: CDS Location: 1684291-1684773 bp Feature: CDS Location: 1684734-1684907 bp Feature: CDS Location: 1685000-1685215 bp Feature: CDS Location: 1685257-1685394 bp Feature: CDS Location: 1685590-1685979 bp Feature: CDS Location: 1686120-1686422 bp Feature: CDS Location: 1686433-1686819 bp Feature: CDS Location: 1687211-1688176 bp Feature: CDS Location: 1688489-1689544 bp Feature: CDS Location: 1689541-1690194 bp Feature: CDS Location: 1690266-1690808 bp Feature: CDS Location: 2019111-2019410 bp Feature: CDS Location: 2019566-2019745 bp Feature: CDS Location: 2020276-2020653 bp Feature: CDS Location: 2020652-2020939 bp Feature: CDS Location: 2021047-2021394 bp Feature: CDS Location: 2021509-2021670 bp Feature: CDS Location: 2021697-2021855 bp Feature: CDS Location: 2022043-2022318 bp Feature: CDS Location: 2022344-2022610 bp Feature: CDS Location: 2022735-2022866 bp Feature: CDS Location: 2023006-2023278 bp Feature: CDS Location: 2023327-2023719 bp Feature: CDS Location: 2023791-2024063 bp Feature: CDS Location: 2024215-2024601 bp Feature: CDS Location: 2024603-2024824 bp Feature: CDS Location: 2024923-2026623 bp Feature: CDS Location: 2026658-2027266 bp Feature: CDS Location: 2027361-2028338 bp Feature: target Des: target gene diversified by DGR Location: 2028547-2030100 bp Feature: CDS Location: 2030155-2030430 bp Feature: target Des: target gene diversified by DGR Location: 2030436-2031035 bp Feature: CDS Location: 2030689-2033178 bp Feature: CDS Location: 2033181-2034263 bp Feature: CDS Location: 2034279-2035199 bp Feature: CDS Location: 2035221-2036120 bp Feature: CDS Location: 2036343-2036591 bp Feature: CDS Location: 2036852-2037676 bp Feature: CDS Location: 2037695-2038051 bp Feature: CDS Location: 2038052-2038429 bp Feature: CDS Location: 2038466-2040100 bp Feature: CDS Location: 2048212-2048628 bp Feature: CDS Location: 2048756-2049631 bp Feature: CDS Location: 2049669-2049962 bp Feature: CDS Location: 2049978-2050160 bp Feature: CDS Location: 2050220-2051827 bp Feature: CDS Location: 2051824-2052429 bp Feature: CDS Location: 2052480-2052740 bp Feature: CDS Location: 2052999-2053337 bp Feature: CDS Location: 2053334-2053750 bp Feature: CDS Location: 2053740-2054630 bp Feature: CDS Location: 2055111-2055509 bp Feature: CDS Location: 2055634-2055984 bp Feature: CDS Location: 2056106-2057155 bp Feature: CDS Location: 2057866-2058225 bp Feature: target Des: target gene diversified by DGR Location: 2058401-2059360 bp Feature: CDS Location: 2059386-2059901 bp Feature: CDS Location: 2059913-2060380 bp Feature: CDS Location: 2060437-2061729 bp Feature: CDS Location: 2061822-2064512 bp Feature: CDS Location: 2064594-2066237 bp Feature: CDS Location: 2066363-2066572 bp Feature: CDS Location: 2066623-2066973 bp Feature: CDS Location: 2066985-2069915 bp Feature: CDS Location: 2259483-2261054 bp Feature: CDS Location: 2261062-2262357 bp Feature: CDS Location: 2262392-2262958 bp Feature: CDS Location: 2262962-2264572 bp Feature: CDS Location: 2264670-2264924 bp Feature: CDS Location: 2265113-2265655 bp Feature: CDS Location: 2265710-2266321 bp Feature: CDS Location: 2266472-2266600 bp Feature: CDS Location: 2266649-2266801 bp Feature: CDS Location: 2266855-2267112 bp Feature: CDS Location: 2267124-2267267 bp Feature: CDS Location: 2267473-2267997 bp Feature: target Des: target gene diversified by DGR Location: 2268073-2271084 bp Feature: CDS Location: 2271168-2271689 bp Feature: CDS Location: 2271661-2272566 bp Feature: CDS Location: 2272649-2272876 bp Feature: RT Des: DGR reverse transcriptase Location: 2273019-2274050 bp Feature: CDS Location: 2274254-2274412 bp Feature: accessory Des: Avd_like Location: 2274446-2274781 bp Feature: target Des: target gene diversified by DGR Location: 2274827-2277976 bp Feature: CDS Location: 2278075-2278254 bp Feature: CDS Location: 2278266-2278616 bp Feature: CDS Location: 2278771-2278983 bp Feature: CDS Location: 2279118-2279996 bp Feature: CDS Location: 2279995-2280174 bp Feature: CDS Location: 2280246-2280428 bp Feature: CDS Location: 2280431-2281351 bp Feature: CDS Location: 2281397-2282263 bp Feature: CDS Location: 2413644-2414117 bp Feature: CDS Location: 2414165-2414359 bp Feature: target Des: target gene diversified by DGR Location: 2414473-2416800 bp Feature: CDS Location: 2416977-2417243 bp Feature: RT Des: DGR reverse transcriptase Location: 2417486-2418520 bp Feature: CDS Location: 2418546-2419118 bp Feature: target Des: target gene diversified by DGR Location: 2419160-2422732 bp Feature: CDS Location: 2422361-2422903 bp Feature: CDS Location: 2422909-2423535 bp Feature: target Des: target gene diversified by DGR Location: 2423846-2424025 bp Feature: CDS Location: 2424302-2425288 bp Feature: CDS Location: 2425288-2425782 bp Feature: CDS Location: 2425975-2429358 bp Feature: CDS Location: 2429359-2429529 bp Feature: CDS Location: 2429535-2430146 bp Feature: target Des: target gene diversified by DGR Location: 2430394-2433954 bp Feature: CDS Location: 2434184-2434666 bp Feature: CDS Location: 2451896-2452033 bp Feature: CDS Location: 2452058-2455003 bp Feature: CDS Location: 2455040-2456119 bp Feature: CDS Location: 2456125-2456949 bp Feature: CDS Location: 2457031-2457789 bp Feature: CDS Location: 2457899-2458030 bp Feature: CDS Location: 2458646-2458879 bp Feature: CDS Location: 2459020-2459160 bp Feature: CDS Location: 2459336-2459584 bp Feature: CDS Location: 2459593-2459736 bp Feature: CDS Location: 2459922-2460188 bp Feature: CDS Location: 2460199-2460441 bp Feature: CDS Location: 2460497-2461237 bp Feature: target Des: target gene diversified by DGR Location: 2461402-2462703 bp Feature: CDS Location: 2462766-2462924 bp Feature: CDS Location: 2463026-2463988 bp Feature: CDS Location: 2464110-2465009 bp Feature: CDS Location: 2465181-2467892 bp Feature: CDS Location: 2467910-2468587 bp Feature: CDS Location: 2468424-2468801 bp Feature: CDS Location: 2469122-2469472 bp Feature: CDS Location: 2469505-2470344 bp Feature: CDS Location: 2470467-2473214 bp Sorry, your browser does not support inline SVG.