myDGR

myDGR report for NC_015510.1

Seq: NC_015510.1 (8371686 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 2719895-2755116 bp 2 Locus 2: 5442330-5471566 bp Zoom in on locus 1 Zoom in on locus 2 Feature: CDS Location: 2719895-2733769 bp Feature: CDS Location: 2734327-2734737 bp Feature: CDS Location: 2735057-2736559 bp Feature: CDS Location: 2737415-2741515 bp Feature: CDS Location: 2741864-2742046 bp Feature: CDS Location: 2742063-2743103 bp Feature: target Des: target gene diversified by DGR Location: 2743742-2745931 bp Feature: CDS Location: 2746006-2746137 bp Feature: CDS Location: 2746316-2747440 bp Feature: CDS Location: 2747875-2748138 bp Feature: CDS Location: 2748319-2751408 bp Feature: CDS Location: 2751857-2752570 bp Feature: CDS Location: 2752850-2753212 bp Feature: CDS Location: 2753452-2755116 bp Feature: CDS Location: 5442330-5444774 bp Feature: CDS Location: 5444932-5452389 bp Feature: CDS Location: 5452509-5453402 bp Feature: CDS Location: 5453644-5454789 bp Feature: CDS Location: 5454801-5454938 bp Feature: target Des: target gene diversified by DGR Location: 5454949-5457825 bp Feature: accessory Des: HRDC Location: 5458012-5458494 bp Feature: accessory Des: Avd_like Location: 5458507-5458854 bp Feature: RT Des: DGR reverse transcriptase Location: 5458851-5459840 bp Feature: CDS Location: 5460686-5460868 bp Feature: CDS Location: 5460881-5461891 bp Feature: CDS Location: 5462246-5462809 bp Feature: CDS Location: 5463020-5463892 bp Feature: CDS Location: 5464305-5465174 bp Feature: CDS Location: 5465285-5465476 bp Feature: CDS Location: 5465693-5466535 bp Feature: CDS Location: 5466884-5471566 bp Sorry, your browser does not support inline SVG.