myDGR

myDGR report for Tdenticola

Seq: AE017226.1 (2843201 bp)

Download:  annotation in gff; reverse transcriptase (RT); target gene; accessory gene

Explore:   TR-VR alignment (colored, MSA); domain organization of the target protein(s); similar RTs

Visualize: summary of the putative DGR system(s) (explain)

Overview 1 Locus 1: 593587-616776 bp 2 Locus 2: 953851-978067 bp 3 Locus 3: 987219-1013114 bp 4 Locus 4: 1075208-1095791 bp 5 Locus 5: 2115558-2136371 bp 6 Locus 6: 2265501-2287568 bp 7 Locus 7: 2292296-2315361 bp 8 Locus 8: 2530265-2551867 bp Zoom in on locus 1 Zoom in on locus 2 Zoom in on locus 3 Zoom in on locus 4 Zoom in on locus 5 Zoom in on locus 6 Zoom in on locus 7 Zoom in on locus 8 Feature: CDS Location: 593587-594186 bp Feature: CDS Location: 594385-594783 bp Feature: CDS Location: 594907-595035 bp Feature: CDS Location: 595039-595641 bp Feature: CDS Location: 595872-596369 bp Feature: CDS Location: 596425-597075 bp Feature: CDS Location: 597268-597996 bp Feature: CDS Location: 597993-598976 bp Feature: CDS Location: 598989-599288 bp Feature: CDS Location: 599494-599979 bp Feature: CDS Location: 599761-600222 bp Feature: CDS Location: 600309-601016 bp Feature: CDS Location: 601272-603557 bp Feature: target Des: target gene diversified by DGR Location: 603634-604794 bp Feature: CDS Location: 604864-605922 bp Feature: CDS Location: 606187-606324 bp Feature: CDS Location: 606342-607823 bp Feature: CDS Location: 607566-607760 bp Feature: CDS Location: 607816-609273 bp Feature: CDS Location: 609288-609599 bp Feature: CDS Location: 611224-611484 bp Feature: CDS Location: 613735-614004 bp Feature: CDS Location: 615469-616776 bp Feature: CDS Location: 953851-955197 bp Feature: CDS Location: 955224-958034 bp Feature: CDS Location: 958203-959396 bp Feature: CDS Location: 959485-959751 bp Feature: CDS Location: 960091-960951 bp Feature: CDS Location: 961053-962264 bp Feature: CDS Location: 962339-963274 bp Feature: CDS Location: 963276-963695 bp Feature: CDS Location: 963713-964192 bp Feature: CDS Location: 964272-965999 bp Feature: CDS Location: 966387-967097 bp Feature: target Des: target gene diversified by DGR Location: 967268-968380 bp Feature: CDS Location: 968433-968795 bp Feature: CDS Location: 968804-970882 bp Feature: CDS Location: 971049-971927 bp Feature: CDS Location: 972150-973451 bp Feature: CDS Location: 973619-974074 bp Feature: CDS Location: 974401-975438 bp Feature: CDS Location: 975462-977006 bp Feature: CDS Location: 977003-978067 bp Feature: CDS Location: 987219-990638 bp Feature: CDS Location: 990660-991457 bp Feature: CDS Location: 991490-992311 bp Feature: CDS Location: 992377-992589 bp Feature: CDS Location: 992653-993216 bp Feature: CDS Location: 993400-994635 bp Feature: CDS Location: 995038-995244 bp Feature: CDS Location: 995319-997091 bp Feature: CDS Location: 997167-998021 bp Feature: CDS Location: 998030-998707 bp Feature: CDS Location: 999019-999939 bp Feature: CDS Location: 999998-1000138 bp Feature: CDS Location: 1000166-1000558 bp Feature: target Des: target gene diversified by DGR Location: 1000555-1001700 bp Feature: CDS Location: 1002008-1002484 bp Feature: CDS Location: 1002600-1004036 bp Feature: CDS Location: 1004069-1005490 bp Feature: CDS Location: 1005636-1006595 bp Feature: CDS Location: 1006611-1008392 bp Feature: CDS Location: 1008835-1009599 bp Feature: CDS Location: 1009614-1011113 bp Feature: CDS Location: 1011177-1013114 bp Feature: CDS Location: 1075208-1075375 bp Feature: CDS Location: 1075391-1077514 bp Feature: CDS Location: 1077527-1078210 bp Feature: CDS Location: 1078302-1078586 bp Feature: CDS Location: 1078802-1078990 bp Feature: CDS Location: 1079020-1080816 bp Feature: CDS Location: 1080980-1083058 bp Feature: CDS Location: 1083072-1084421 bp Feature: CDS Location: 1084458-1084631 bp Feature: CDS Location: 1084846-1085184 bp Feature: target Des: target gene diversified by DGR Location: 1085350-1085955 bp Feature: CDS Location: 1086322-1086456 bp Feature: CDS Location: 1086726-1088570 bp Feature: CDS Location: 1088570-1090447 bp Feature: CDS Location: 1090647-1093028 bp Feature: CDS Location: 1093121-1093675 bp Feature: CDS Location: 1093753-1094247 bp Feature: CDS Location: 1094425-1094583 bp Feature: CDS Location: 1094634-1095791 bp Feature: CDS Location: 2115558-2115776 bp Feature: CDS Location: 2115884-2116243 bp Feature: CDS Location: 2116322-2117653 bp Feature: CDS Location: 2117653-2118726 bp Feature: CDS Location: 2118853-2119686 bp Feature: CDS Location: 2119703-2120542 bp Feature: CDS Location: 2120560-2121138 bp Feature: CDS Location: 2121364-2123343 bp Feature: CDS Location: 2123340-2124551 bp Feature: CDS Location: 2124568-2124855 bp Feature: CDS Location: 2125041-2125187 bp Feature: target Des: target gene diversified by DGR Location: 2125639-2126709 bp Feature: CDS Location: 2126706-2127542 bp Feature: CDS Location: 2127617-2128606 bp Feature: CDS Location: 2128615-2131173 bp Feature: CDS Location: 2131184-2131384 bp Feature: CDS Location: 2131543-2131830 bp Feature: CDS Location: 2131849-2132964 bp Feature: CDS Location: 2132992-2133585 bp Feature: CDS Location: 2133665-2135377 bp Feature: CDS Location: 2135469-2136371 bp Feature: CDS Location: 2265501-2266472 bp Feature: CDS Location: 2266535-2267194 bp Feature: CDS Location: 2267377-2268822 bp Feature: CDS Location: 2268922-2269206 bp Feature: CDS Location: 2269161-2269487 bp Feature: CDS Location: 2270005-2270538 bp Feature: CDS Location: 2270596-2271375 bp Feature: CDS Location: 2271381-2272400 bp Feature: CDS Location: 2272400-2273335 bp Feature: CDS Location: 2273440-2274678 bp Feature: CDS Location: 2274750-2276207 bp Feature: target Des: target gene diversified by DGR Location: 2276644-2277705 bp Feature: CDS Location: 2277715-2278542 bp Feature: CDS Location: 2278596-2279741 bp Feature: CDS Location: 2279659-2282124 bp Feature: CDS Location: 2282304-2283044 bp Feature: CDS Location: 2283160-2284380 bp Feature: CDS Location: 2284380-2286197 bp Feature: CDS Location: 2286272-2286514 bp Feature: CDS Location: 2286502-2286831 bp Feature: CDS Location: 2286846-2287568 bp Feature: CDS Location: 2292296-2293477 bp Feature: CDS Location: 2293593-2295200 bp Feature: CDS Location: 2295424-2296491 bp Feature: CDS Location: 2296617-2297327 bp Feature: CDS Location: 2297493-2297879 bp Feature: CDS Location: 2298123-2299367 bp Feature: CDS Location: 2299367-2300281 bp Feature: CDS Location: 2300333-2302123 bp Feature: CDS Location: 2302284-2302694 bp Feature: RT Des: DGR reverse transcriptase Location: 2303132-2304118 bp Feature: accessory Des: HRDC Location: 2304072-2304554 bp Feature: CDS Location: 2304658-2304855 bp Feature: target Des: target gene diversified by DGR Location: 2305021-2306010 bp Feature: CDS Location: 2306370-2308469 bp Feature: CDS Location: 2308571-2309011 bp Feature: CDS Location: 2309070-2310116 bp Feature: CDS Location: 2310341-2311216 bp Feature: CDS Location: 2311216-2312022 bp Feature: CDS Location: 2312035-2312727 bp Feature: CDS Location: 2312820-2313575 bp Feature: CDS Location: 2313880-2315361 bp Feature: CDS Location: 2530265-2530681 bp Feature: CDS Location: 2530721-2531716 bp Feature: CDS Location: 2531814-2533181 bp Feature: CDS Location: 2533328-2534212 bp Feature: CDS Location: 2534322-2536055 bp Feature: CDS Location: 2536057-2537724 bp Feature: CDS Location: 2537793-2539166 bp Feature: CDS Location: 2539945-2540622 bp Feature: target Des: target gene diversified by DGR Location: 2541062-2542231 bp Feature: CDS Location: 2542257-2542493 bp Feature: CDS Location: 2542544-2543932 bp Feature: CDS Location: 2543965-2544795 bp Feature: CDS Location: 2544929-2546539 bp Feature: CDS Location: 2546608-2547888 bp Feature: CDS Location: 2548238-2550064 bp Feature: CDS Location: 2550051-2550575 bp Feature: CDS Location: 2550626-2551867 bp Sorry, your browser does not support inline SVG.